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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935285.1_cds_XP_016481145.1_72508
CDS Infomation

[gene=LOC107802201] [db_xref=GeneID:107802201] [protein=LOW QUALITY PROTEIN: telomere repeat-binding protein 3-like] [exception=unclassified translation discrepancy] [protein_id=XP_016481145.1] [location=complement(join(14580..14780,15247..15310,15404..15727,15868..16112,16615..16694,16827..16874,16957..17154,17263..17494,17496..18119,18210..18290))] [gbkey=CDS]
Sequence

ATGGTGTCAAAGAAGAGGCTGAATTGTGGTTTTAGTGGCTATCAAATTCCTGTTATACCT
AAAGCTCCTAGATCAGCTAGAAAGAGACGCCCCTGTAACAAATTGGACGATGATCAAATT
TGTGCATTTGAATTATTGGCGGCTGTAGCTGGCAAACTGTTACTTGAGAGTGAAAGTTCT
GCTTCAAGTAATGCAGGTGCACCAGCGGGAAAATATGAGCTCGCTAATTGCAGGGATAGT
ATTAAACATGAACAGGTGGAAGATGATAAAGCTGTGAGATCAGAGTGTCTTGACCAGGGA
AGTTGTATAGAAAGTGCCTATATACCAGAAGCTGCAGAGCAAGAGCAAACTTTCAAGAAT
GGTTTGAGTAAACCTTTTGCCGAAAATAAATCCTTTTTAGAGCATACATCTACTATTATA
GGTTCTTATTCCTTATTAAAAGACTGGTCTGACGTGAAGTTGGAAAGCTGCAAAGAGGTC
AGTGCAGATGCACAGTTACAAACCAAAGTGGAAGGTGGATCTCCTGATCTGGCTGATCCA
TTTGATATTAGAATTGTGGAAGGAACTCGAAAACAGTTAGATGATGACAGCAAACAGACT
GAATTAACTGTGGTGAATAGTTGCAGTATAAAAGCTCCAATAGAAAAGAATGTGAATAAT
AGTGTCTTGGTTAACTCAGATAGTAGTGTACAGTTGNGTACAGTTCCCTTGTACAGGGAC
CCGGTTCCTTGTGCTTCTTTTGTAAAGTCAAGGAACAATGTAAAGTTAGGTATTAGAGAT
GATGACGAAAATTATTTTGGGTGCTATAGGCATAGCACTAAGATTAGGACCTTCAGGCCA
ACATCACGTATCACATACAGAAGAATAAGAAAGATGTTGACATCTAGACACTGGAAAGTA
GCTCCTAAGTTGAAGGACTGTGAGCGTTCTTACTCTAATGATGGAGTGAAGTCCTTTTAT
TGCAATAGGAAAAGCAAGCGTGGGAATGAAAGGTGTCGATTTGAAATTCCTTCCAAGAGA
AGGAAATTGTATGACCATGGCTTTGCTGTGGCGTATGACCAGGAGGCCAGTAGCAAAAGC
ATTTCAAATTCACATGAAAAGGGAATCAAGGGAGATACCGCAATTCCACCTAAAGGAGCT
GGGGCTTCAGCTTCAGTTAGAAATCATCAGAAGGATCCTAATGTAAAATTTAGCATTAAT
TCCTTCAAGGTGCCAGAGCTTTATATTGAGGTTCCTGAAATGGAAACAATTGGTTCGCTG
AAGAGAACAGTAATGGAAGCAGTAACAGCTATCCTGGGAAGTGGATTACGGGTGGGGGTG
GTTCTTCAGGGAAAGAAGGTCAGAGATGACAATAGAACTCTACAGCAAGCTGGTATTTCA
CCGAATGACAATCTTGATACATTGGGTTTCACTTTGGAACCTAGTTTCAGCAAGGTTCCT
CTGTCTTTGTCTCCTAACGATGATACTCTTGCTTCAGCATCATATATTACAGACCAAGAA
TTATCTAGGCATCCATCTAGTCCTATCTTCGAATTGGGTCCTCCCAATGCTTTGTCAGAT
CCTCCAGAGGCTAAGTTGGACAAGCATGATGAGAGTAACCATGAACTGGAGATGTCACCT
ACAACTCCAATTGATCAATCAGCTGATGAAGCTTTTCCAGATTTTAAAGCCTTGGCCATA
GTTCCTCCTGTGAATACAGAGGCACTTGCTGTGGTTCCAGTGAATCATAAAAACAGACGT
TCTGAACTTTCACAGCGTAGGACAAGGAGGCCATTCTCAGTTGCTGAAGTAGAAGCGCTG
GTCGAAGCTGTAGAGCAGCTTGGAACTGGAAGGTGGCGTGACGTTAAAATGCGTGCTTTT
GATAATGCTGATCACCGGACTTATGTTGACTTGAAGGATAAATGGAAGACACTAGTTCAT
ACAGCAAGTATTGCCCCACAACAAAGAAGGGGAGAGCCGGTGCCCCAGGAACTTCTTGAC
AGGGTCTTAGCTGCCCATTCCTATTGGTCTCAGCATCAGGCCAAGCAACACGCCAAACAA
CATGCTGAACCTCTGAAAATTGTGGATGCTCAGGCGCAGAATGGCGTTGCTGCTTGA

Peptide Sequence

PEP ID

XP_016481145.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: telomere repeat-binding protein 3-like [Nicotiana tabacum]
Sequence

MVSKKRLNCGFSGYQIPVIPKAPRSARKRRPCNKLDDDQICAFELLAAVAGKLLLESESS
ASSNAGAPAGKYELANCRDSIKHEQVEDDKAVRSECLDQGSCIESAYIPEAAEQEQTFKN
GLSKPFAENKSFLEHTSTIIGSYSLLKDWSDVKLESCKEVSADAQLQTKVEGGSPDLADP
FDIRIVEGTRKQLDDDSKQTELTVVNSCSIKAPIEKNVNNSVLVNSDSSVQLXTVPLYRD
PVPCASFVKSRNNVKLGIRDDDENYFGCYRHSTKIRTFRPTSRITYRRIRKMLTSRHWKV
APKLKDCERSYSNDGVKSFYCNRKSKRGNERCRFEIPSKRRKLYDHGFAVAYDQEASSKS
ISNSHEKGIKGDTAIPPKGAGASASVRNHQKDPNVKFSINSFKVPELYIEVPEMETIGSL
KRTVMEAVTAILGSGLRVGVVLQGKKVRDDNRTLQQAGISPNDNLDTLGFTLEPSFSKVP
LSLSPNDDTLASASYITDQELSRHPSSPIFELGPPNALSDPPEAKLDKHDESNHELEMSP
TTPIDQSADEAFPDFKALAIVPPVNTEALAVVPVNHKNRRSELSQRRTRRPFSVAEVEAL
VEAVEQLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQELLD
RVLAAHSYWSQHQAKQHAKQHAEPLKIVDAQAQNGVAA

Transcript Sequence

Gene sequence data has not been registered.